Browse of TCMCG002C22000 protein

CDS

Accession Number	TCMCG002C22000
gbkey	CDS
Protein Id	XP_020102558.1
Location	complement(join(5116954..5117019,5117132..5117215,5117680..5117808,5118214..5118282,5118377..5118457,5118576..5118680,5118789..5119019,5119246..5120327,5120416..5120476,5121015..5121978,5122075..5122196,5122284..5122442,5122800..5122940,5123524..5123682,5123777..5123893,5124459..5124569,5124661..5125035))
Gene	LOC109720087
GeneID	109720087
Organism	Ananas comosus

Protein

Length	1351aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA371634
db_source	XM_020246969.1
Definition	E3 ubiquitin-protein ligase UPL4-like [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	E3 ubiquitin-protein ligase UPL4
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K10590        [VIEW IN KEGG]
EC	2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04120        [VIEW IN KEGG] map04120        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0061630        [VIEW IN EMBL-EBI] GO:0061659        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGACGCCCCGGGCGGTGACGGCGCCGACTTCTACGCTGACATCCTCCGCAACCTCGACCCCGGCGCCGCGGGCTTCGCCAGCGCCGGCGCGGCGCTCTCCGCGCTCTGCGACGCCTTTGCCATCGTCCCCGACGAGTTCTTCGACTCCCTCGCCATCGACGACCTCGCCCGCCACCTCGTCGACCTCGCCTCCGGCCGCGGCGGCGGCGGCGAAGGGGCCGTCGACCCCTCCGTCGCTGTCCTCGCCGCGCGCGCGATCACCCTCGTCTGCGACGCGAGCCCCGACTCCGCCGGCGCCTTCGTCCGCCGCGGCGTCGTCCCCGCGCTCTGCGCGCACGTGGCGAGCATCAAGTACATGGACCTGGCCGAGCAGTGTTTGCGAGCGCTGGAGAAGATATCGCTGGAAAGGCCGGAGAAGTGCTTAAGCGCCGGCATTGTCCCTGCGGTTCTCAAGCACTTTGATTTCTTCTCATTATCCACACAGAGGGTCGTAGTTTCAATTATGTCGAACGTATTCTCTGTGATCAACTTGGAACACTCTTCCCTTGTGATCGAAGCTGTTCCCGTCTTATGCAACCTTCTGCAATCGGAAGAAAAGCAGATTGTGGATGGTGCTCTTGATTGCTTGTTGGTGATTGGGCAAGTCTTTCATACTTCTCCAAAGCTGTGTGATGAGATCTGCATGCTAGGAGTGGTCGCTCATTCCGTACAGTTGATGAACTCCAACAATTCGAGGTCTCTGGACAGAGATAATTTACTATATTTGATCCAGCTACTTGGATTTCTTGCTTCGGGCTCCATCATTGCAGTGAGGATTCTCTTCGAATTGAACATTGGCAGTGTGCTTAGTGGGGCACTCACATCACGCAACCTCTCTTTTCATAATCTGGAGCTTGATCTGATATATGATGTTCTGAACTTGGTGAATCAGTTAATACCTATGGTTGAGACGTGTAATCAAGAAAAGACTCAACTGTTACAGCAGAAGAAGAAGACTATATTGGAAAATCATATCCATTTTCATCAGTTTGTAACGAACATCGTTTTTCTTTCAATTCAGTTTGTGGGTTCTAATGCAAAATTAGCTGTCTCATACGGGTTCCTTTGTATGTTATGCAACATATTTTCCTTAAGCACTCCTGAGCTGCTTGTGGAGTTGAGTAAGACAACAAACATCTCAAGCCTTTTGGCTTCCTTGTCGGCACATAAAGATCACCAGATACTTTTCCACACTCTGAAGATTGCTGAGATCCTTTTAGAAAAGGCCCCTGATTTTCACTTAATATCTTTCTGCAAAGAGGGTTTGGTTAATTTCATTGATGCAATCATACTGAGAGAAAGAAACCCTCAACAGTCTAAACTCAGAAAGGACAAAGATAAAAGCAATGTTGCTAACTCGTGCTATTGCTATTCATTTGGTTCTGATTCATCCCCATCATCAGACAAAGAAGCATGCAGGGTGGGAAAAGAAGCAGTTCTTGCTTTGGCCGAAAGTATCAGAAACACTTTTTTCTCCACAACAAGCGGTTCGAAGAATGGTGGTTTTGTGAGGATCCTTCAGAATTTGAAAGATTTCTTCTCTATATCAAATAATAACTACAATGCCACCAAGTCCCTCACTAAAGATGGGCAAACTAGGGAGAAGATATGTGATGCATTGCACCAAGTTAAGGCTATGTCGAATCTTGAGTTTGTTGATAGTGGTATAATTAGGTCTTTGGCTTGCTACTTGTCCAATGGGAGATTTCTGAAAGGAGAAATAAAAGATACTGATAAATTGTTGAAGCATTTACATGAGGTGGAAATGAGATTGGATGCATTTGCTTGTATAGCTCTCCTTATACCAGATCAGAGGTCAGAGGAGAATATTCTTTCCATTTTGGTGCGGAAGTTGCAAGACGCATTGCATGCATCTTGTTGCGACAATTTTTCTTTAATTTTAAGTGATAATTATCAATCTGAACTAAAGCATGTGACCATCCCGCTGAGAAACTCGGAATTTATGAAGATAAAGGTGCAATTTAGGAGGGCGGTAAGGGAGAAAAATTTGGCAAACTTTGACGATGTTTTGGCCATTGACCTTAATTCGCCTCTTGAGGCCATTGAAGCACTCTTATGGCCCCACATATCCTCAAACTTTTTGAAGGGGTTGAAAAAATCAACTAGATCAAAGACTAACGCTACAGCCCCAAGGGAGCTTACGAAAGAAACATCCGAATTGAGATTTTACTATAAGCATAAAAGGCTAAACCGGTCTTTAACCCTTTTCGAATCTATACTTCGAGAAAAGACTGATGCAGAGGGTGATTTGTTTGTGAATTCATCCTTCTTTGATGAGATACACGTAGTAACTTATTTGAGTGCCAGGAAAGCCAGTAGCACTTCTTCCCAAAAGCTCCATTATACTTCTGGATCAATACTTCCATGGCAAAAGCATTCTTTTTTCTCTAGTATGGTCATCGGAAGGATCCCATGTGAGCTAGAACAACTGAGCCCTTCATATGATATACTTTTTATTCTGAAAATATTGGAAGGACTTAACAGATTTTCCTTTCAAATTTCTACCCAAGAAAGGATAGATGAATTTGCTGAAGGGAAAATAAAAAGTTTCGATGACATAAAGACGTCAAATTTTTTGATGCCGCAGTCTGAATTTGTCAGTATAATGTTGGCTAACAAATTGGAGCAGCAAATGAAAGATTCCTTATTCGAAAAAGGTGTCACCCCTTCATGGTGCATTCATTTGATGGCAGCCTCTCCTTTCTTATTCTCTTTCGACACAAGATGGAAATACTTTTGTATCACTTTGTGTAATGCATTACAAAATCGGCTTTTTTTGAGTGAGCCGAATTCAAAAGAACCTGCTAGCAAGAAGTACAAAGTAGATCGTGAACAAATACTTCAATCAGCTTCGTTGGTGATGGCTTCTCATGCTCGTAGCATGGATTTAATTGAAATAGAATATCATGGAGAAGCTGGGACAGGTAGAGGGCCTGCTGTTGAATTTTATACTACTTCGAGTAGGGAATTGCAAAAAGTTGGTCTTGGCTTGTGGAGGGGAGATTGTTCAGAAAAGGGAGTAGTACATGCTGATGGATACGTATTTGCTCCATTTGGTCTTTTTCCTCATCCGTGGTCAGTAGCAGGAAGTTCTTCTGGTGGCATTGACTTCTCGGATGTGCTTAAGCACTTCTTCCTTCTTGGACAGCTTGTAGCCAGAGCCATTTTAGATGGAAGGATCTTGGACCTCCCTCTCTCTAAACCATTCTATAAAGCTATGCTTGATCAGGAAATTGACATGTATGATATTGAATCATTTGATCCTGAGCTGGGGAAGATAATGATCGAATTTCAAGCTCTTGTTAAGAGGAAAAAGTATTTGGAAACCAATTCAGTGGAGAATTCTCCACATGTGTTCGATTTATCGTACCGGAATTTAGCAATAGAAGACCTTTGTCTCCAATTTACTCTCCCTGGTTATTGCGATTATGATCTGAAACCTGGAGGCAGCTCTAAAATGGTTAATCTCGACAACTTGGAGGAATATGTCTCATTAGTTGTTGATGCAACAACTGGAAGCGGAGTGTCAAGGCAGCTCGAAGCCTTTAAGTCTGGAATAAACAAGGTTTTCCCCATAAAGACACTTAAAATTTTCACTGAAGAAGAGCTTGAACGAATACTTTGCGGGGAACAAGATGCTTGGGCTTCCTGCAACCTTGTTGAGCACATTCAATTTGATCATGGCTATACAGCTGTTAGTCCTGCTGCAATCAATTTATTAGAGATAATGCGAGAATTCTCTAGGGATGAGCAAAGAGCCTTCTTACAGTTTGTGACTGGGGCCCCTCGGGTTCCTCTGGGAGGTTTTTCGTCACTCAATCCAAAGCTCACCGTTGTCCAAAAGCAGTGTGATGGTGATGCCAATTTGGAATTACCAAGCGTGAACATCTGCCACCATTTTCTAAAGCTTCCCCCTTACACTACAAAGGAGAAAATGAGGGAGAAGCTCTTATACGCTATGACGGAAGGAGTCGGAGCTCTCCTCTTATCATGA

Protein:   MDAPGGDGADFYADILRNLDPGAAGFASAGAALSALCDAFAIVPDEFFDSLAIDDLARHLVDLASGRGGGGEGAVDPSVAVLAARAITLVCDASPDSAGAFVRRGVVPALCAHVASIKYMDLAEQCLRALEKISLERPEKCLSAGIVPAVLKHFDFFSLSTQRVVVSIMSNVFSVINLEHSSLVIEAVPVLCNLLQSEEKQIVDGALDCLLVIGQVFHTSPKLCDEICMLGVVAHSVQLMNSNNSRSLDRDNLLYLIQLLGFLASGSIIAVRILFELNIGSVLSGALTSRNLSFHNLELDLIYDVLNLVNQLIPMVETCNQEKTQLLQQKKKTILENHIHFHQFVTNIVFLSIQFVGSNAKLAVSYGFLCMLCNIFSLSTPELLVELSKTTNISSLLASLSAHKDHQILFHTLKIAEILLEKAPDFHLISFCKEGLVNFIDAIILRERNPQQSKLRKDKDKSNVANSCYCYSFGSDSSPSSDKEACRVGKEAVLALAESIRNTFFSTTSGSKNGGFVRILQNLKDFFSISNNNYNATKSLTKDGQTREKICDALHQVKAMSNLEFVDSGIIRSLACYLSNGRFLKGEIKDTDKLLKHLHEVEMRLDAFACIALLIPDQRSEENILSILVRKLQDALHASCCDNFSLILSDNYQSELKHVTIPLRNSEFMKIKVQFRRAVREKNLANFDDVLAIDLNSPLEAIEALLWPHISSNFLKGLKKSTRSKTNATAPRELTKETSELRFYYKHKRLNRSLTLFESILREKTDAEGDLFVNSSFFDEIHVVTYLSARKASSTSSQKLHYTSGSILPWQKHSFFSSMVIGRIPCELEQLSPSYDILFILKILEGLNRFSFQISTQERIDEFAEGKIKSFDDIKTSNFLMPQSEFVSIMLANKLEQQMKDSLFEKGVTPSWCIHLMAASPFLFSFDTRWKYFCITLCNALQNRLFLSEPNSKEPASKKYKVDREQILQSASLVMASHARSMDLIEIEYHGEAGTGRGPAVEFYTTSSRELQKVGLGLWRGDCSEKGVVHADGYVFAPFGLFPHPWSVAGSSSGGIDFSDVLKHFFLLGQLVARAILDGRILDLPLSKPFYKAMLDQEIDMYDIESFDPELGKIMIEFQALVKRKKYLETNSVENSPHVFDLSYRNLAIEDLCLQFTLPGYCDYDLKPGGSSKMVNLDNLEEYVSLVVDATTGSGVSRQLEAFKSGINKVFPIKTLKIFTEEELERILCGEQDAWASCNLVEHIQFDHGYTAVSPAAINLLEIMREFSRDEQRAFLQFVTGAPRVPLGGFSSLNPKLTVVQKQCDGDANLELPSVNICHHFLKLPPYTTKEKMREKLLYAMTEGVGALLLS